Khalili, Mey: search on Z-Library

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1

A united residue force-field for calcium–protein interactions

Mey Khalili, Jeffrey A. Saunders, Adam Liwo, Stanislaw Ołdziej, Harold A. Scheraga

Journal:

Protein Science

Year:

2004

Language:

english

File:

PDF, 240 KB

english, 2004

2

Molecular Dynamics with the United-Residue Model of Polypeptide Chains. II. Langevin and Berendsen-Bath Dynamics and Tests on Model α-Helical Systems

Khalili, Mey, Liwo, Adam, Jagielska, Anna, Scheraga, Harold A.

Journal:

Journal of Physical Chemistry B

Year:

2005

Language:

english

File:

PDF, 432 KB

english, 2005

3

Modification and Optimization of the United-Residue (UNRES) Potential Energy Function for Canonical Simulations. I. Temperature Dependence of the Effective Energy Function and Tests of the Optimization Method with Single Training Proteins

Liwo, Adam, Khalili, Mey, Czaplewski, Cezary, Kalinowski, Sebastian, Ołdziej, Stanisław, Wachucik, Katarzyna, Scheraga, Harold A.

Journal:

Journal of Physical Chemistry B

Year:

2007

Language:

english

File:

PDF, 994 KB

english, 2007

4

Symmetrization of the AMBER and CHARMM force fields

Edyta Małolepsza, Birgit Strodel, Mey Khalili, Semen Trygubenko, Szilard N. Fejer, David J. Wales

Journal:

Journal of Computational Chemistry

Year:

2010

Language:

english

File:

PDF, 380 KB

english, 2010

5

Kinetic Studies of Folding of the B-domain of Staphylococcal Protein A with Molecular Dynamics and a United-residue (UNRES) Model of Polypeptide Chains

Mey Khalili, Adam Liwo, Harold A. Scheraga

Journal:

Journal of Molecular Biology

Year:

2006

Language:

english

File:

PDF, 359 KB

english, 2006

6

[IEEE 2010 IEEE International Conference on Multisensor Fusion and Integration for Intelligent Systems (MFI 2010) - Salt Lake City, UT, USA (2010.09.5-2010.09.7)] 2010 IEEE Conference on Multisensor Fusion and Integration - Heading prediction in unmanned ground vehicles by laser compass

Khalili, Mey, Weatherly, Richard, Bolling, Robert, Jacyna, Garry, Robbins, Scott, Ring, Keven, Grabowski, Bob, Forbes, Kevin, Cicalese, Cindy

Year:

2010

Language:

english

File:

PDF, 1.52 MB

english, 2010

7

Pathways for Conformational Change in Nitrogen Regulatory Protein C from Discrete Path Sampling

Khalili, Mey, Wales, David J.

Journal:

Journal of Physical Chemistry B

Year:

2008

Language:

english

File:

PDF, 847 KB

english, 2008

8

A Localized Specific Interaction Alters the Unfolding Pathways of Structural Homologues

Xu, Guoqiang, Narayan, Mahesh, Kurinov, Igor, Ripoll, Daniel R., Welker, Ervin, Khalili, Mey, Ealick, Steven E., Scheraga, Harold A.

Journal:

Journal of the American Chemical Society

Year:

2006

Language:

english

File:

PDF, 399 KB

english, 2006

9

Protein-Folding Dynamics: Overview of Molecular Simulation Techniques

Scheraga, Harold A., Khalili, Mey, Liwo, Adam

Journal:

Annual Review of Physical Chemistry

Year:

2007

Language:

english

File:

PDF, 231 KB

english, 2007

10

Molecular Dynamics with the United-Residue Model of Polypeptide Chains. I. Lagrange Equations of Motion and Tests of Numerical Stability in the Microcanonical Mode

Khalili, Mey, Liwo, Adam, Rakowski, Franciszek, Grochowski, Paweł, Scheraga, Harold A.

Journal:

Journal of Physical Chemistry B

Year:

2005

Language:

english

File:

PDF, 275 KB

english, 2005

11

Erratum: Symmetrization of the AMBER and CHARMM force fields [J. Comp. Chem. 31, 1402]

Edyta Małolepsza, Birgit Strodel, Mey Khalili, Semen Trygubenko, Szilard Fejer, Joanne M. Carr, David J. Wales

Journal:

Journal of Computational Chemistry

Year:

2012

Language:

english

File:

PDF, 419 KB

english, 2012

12

Computer Simulations of Peptides from the p53 DNA Binding Domain

Khalili, Mey, Wales, David J.

Journal:

Journal of Chemical Theory and Computation

Year:

2009

Language:

english

File:

PDF, 3.50 MB

english, 2009

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